Bi-Parental QTL | ||||||
---|---|---|---|---|---|---|
cqSeed weight | ||||||
QTL Name | LG (GmComposite2003) | Start (cM) | End (cM) | |||
cqSeed weight-001 | G | 52.42000 | 54.42 | |||
cqSeed weight-002 | G | 44.40000 | 46.40 | |||
cqSeed weight-003 | I | 35.40000 | 37.40 | |||
cqSeed weight-004 | C2 | 42.49000 | 42.50 | |||
cqSeed weight-005 | L | 68.36000 | 70.36 | |||
cqSeed weight-006 | D1a | 17.52000 | 25.28 | |||
cqSeed weight-007 | L | 68.36000 | 70.36 | |||
cqSeed weight-008 | C2 | 34.34000 | 51.84 | |||
cqSeed weight-009 | L | 68.35000 | 70.36 | |||
cqSeed weight-010 | D1a | 17.52000 | 24.13 | |||
cqSeed weight-011 | C2 | 34.34000 | 51.84 | |||
cqSeed weight-012 | L | 68.35000 | 70.36 | |||
cqSeed weight-013 | C2 | 27.85000 | 40.29 | |||
Seed weight | ||||||
QTL Name | LG (GmComposite2003) | Start (cM) | End (cM) | |||
Seed weight 1-1 | U3 | 116.95000 | 119.65 | |||
Seed weight 1-2 | U20 | 32.90000 | 33.70 | |||
Seed weight 1-3 | U7 | 1.30000 | 9.40 | |||
Seed weight 2-1 | C1.1 | 2.30000 | 5.30 | |||
Seed weight 2-2 | C2.2 | 12.60000 | 16.65 | |||
Seed weight 2-3 | GA2_29 | 16.95000 | 19.20 | |||
Seed weight 2-4 | F.2 | 65.95000 | 68.85 | |||
Seed weight 2-5 | G.2 | 14.55000 | 17.20 | |||
Seed weight 2-6 | J | 2.55000 | 16.65 | |||
Seed weight 2-7 | K | 22.45000 | 22.70 | |||
Seed weight 3-1 | D2 | 9.35000 | 11.35 | |||
Seed weight 3-2 | F.2 | 11.55000 | 31.15 | |||
Seed weight 3-3 | G | 96.24002 | 98.24 | |||
Seed weight 3-4 | K | 66.73001 | 68.73 | |||
Seed weight 3-5 | L | 101.15000 | 125.80 | |||
Seed weight 3-6 | L.1 | 1.30000 | 10.85 | |||
Seed weight 3-7 | ||||||
Seed weight 3-8 | P | 13.30000 | 19.10 | |||
Seed weight 3-9 | ||||||
Seed weight 4-1 | B | 88.40000 | 94.70 | |||
Seed weight 4-2 | G | 81.35000 | 84.15 | |||
Seed weight 4-3 | L | 46.00000 | 49.40 | |||
Seed weight 4-4 | J | 65.80000 | 67.15 | |||
Seed weight 4-5 | A | 221.25000 | 232.60 | |||
Seed weight 4-6 | L | 127.45000 | 130.85 | |||
Seed weight 5-1 | L | 86.10000 | 88.10 | |||
Seed weight 5-2 | C1 | 63.50000 | 65.50 | |||
Seed weight 6-1 | E | 64.50000 | 66.50 | |||
Seed weight 6-2 | A2 | 65.10000 | 67.10 | |||
Seed weight 6-3 | B1 | -1.00000 | 1.00 | |||
Seed weight 6-4 | A1 | 9.10000 | 11.10 | |||
Seed weight 6-5 | C2 | 134.60000 | 136.60 | |||
Seed weight 6-6 | F | 109.40000 | 111.40 | |||
Seed weight 6-7 | C1 | 21.70000 | 23.70 | |||
Seed weight 7-1 | A2 | 103.50000 | 105.50 | |||
Seed weight 7-2 | G | -1.00000 | 1.00 | |||
Seed weight 7-3 | A1 | 75.20000 | 77.20 | |||
Seed weight 7-4 | D1a+Q | 54.90000 | 56.90 | |||
Seed weight 7-5 | C2 | 23.70000 | 25.70 | |||
Seed weight 7-6 | M | 15.50000 | 17.50 | |||
Seed weight 7-7 | L | 79.00000 | 81.00 | |||
Seed weight 8-1 | I | 11.30000 | 13.30 | |||
Seed weight 9-1 | I | 20.40000 | 22.40 | |||
Seed weight 10-1 | A1 | 78.30000 | 80.30 | |||
Seed weight 10-2 | A2 | 105.40000 | 107.40 | |||
Seed weight 10-3 | B1 | 104.20000 | 106.20 | |||
Seed weight 10-4 | B2 | 69.60000 | 71.60 | |||
Seed weight 10-5 | C2 | 23.60000 | 25.60 | |||
Seed weight 10-6 | F | -1.40000 | 1.40 | |||
Seed weight 10-7 | F | 17.20000 | 19.20 | |||
Seed weight 10-8 | G | 0.40000 | 2.40 | |||
Seed weight 10-9 | G | 65.40000 | 67.40 | |||
Seed weight 10-10 | K | 55.90000 | 57.90 | |||
Seed weight 10-11 | M | 11.80000 | 13.80 | |||
Seed weight 11-1 | B1 | 58.66000 | 60.66 | |||
Seed weight 11-2 | E | 22.70000 | 24.70 | |||
Seed weight 11-3 | F | 73.70000 | 75.70 | |||
Seed weight 11-4 | G | 96.24000 | 98.24 | |||
Seed weight 12-1 | M | 111.08000 | 113.08 | |||
Seed weight 12-2 | O | 63.00000 | 65.00 | |||
Seed weight 12-3 | L | 92.89000 | 94.89 | |||
Seed weight 12-4 | M | 79.02000 | 81.02 | |||
Seed weight 12-5 | L | 33.54000 | 35.54 | |||
Seed weight 12-6 | O | 4.44000 | 6.44 | |||
Seed weight 12-7 | O | 81.09000 | 83.09 | |||
Seed weight 12-8 | I | 21.84000 | 23.84 | |||
Seed weight 13-1 | A2 | 53.90000 | 55.90 | |||
Seed weight 13-2 | B2 | 64.60000 | 66.60 | |||
Seed weight 13-3 | B2 | 71.80000 | 73.80 | |||
Seed weight 13-4 | C1 | -1.00000 | 1.00 | |||
Seed weight 13-5 | D2 | 56.10000 | 58.10 | |||
Seed weight 13-6 | F | 62.70000 | 64.70 | |||
Seed weight 13-7 | H | 37.90000 | 39.90 | |||
Seed weight 13-8 | H | 80.00000 | 82.00 | |||
Seed weight 13-9 | L | 91.00000 | 93.00 | |||
Seed weight 13-10 | L | 29.20000 | 31.20 | |||
Seed weight 13-11 | M | 132.80000 | 134.80 | |||
Seed weight 14-1 | D2 | 28.56000 | 30.56 | |||
Seed weight 15-1 | C2 | 107.60000 | 119.80 | |||
Seed weight 15-2 | D1a | 42.00000 | 88.20 | |||
Seed weight 15-3 | F | 51.20000 | 77.70 | |||
Seed weight 15-4 | G | 33.10000 | 47.40 | |||
Seed weight 15-5 | I | 82.78000 | 100.78 | |||
Seed weight 15-6 | K | 46.63000 | 56.62 | |||
Seed weight 15-7 | L | 62.20000 | 70.50 | |||
Seed weight 16-1 | C2 | 109.00000 | 116.00 | |||
Seed weight 16-2 | C2 | 105.00000 | 112.45 | |||
Seed weight 16-3 | H | 1.00000 | 23.00 | |||
Seed weight 17-1 | L | 65.26000 | 85.26 | |||
Seed weight 18-2 | D2 | 46.73000 | 48.73 | |||
Seed weight 18-1.1 | D1a | 17.52000 | 107.89 | |||
Seed weight 18-1.2 | D1a | 16.52000 | 18.52 | |||
Seed weight 19-1 | C2 | 109.00006 | 116.00 | |||
Seed weight 19-2 | F | 55.45000 | 62.45 | |||
Seed weight 20-1 | B1 | 53.41000 | 57.91 | |||
Seed weight 20-2 | C1 | 72.84000 | 74.84 | |||
Seed weight 20-3 | B1 | 56.91000 | 58.91 | |||
Seed weight 20-4 | B1 | 53.41000 | 57.91 | |||
Seed weight 21-1 | B1 | 31.50000 | 33.50 | |||
Seed weight 21-2 | D2 | 21.97000 | 23.97 | |||
Seed weight 21-3 | K | 66.73000 | 68.73 | |||
Seed weight 22-1 | A2 | 95.97000 | 97.97 | |||
Seed weight 22-2 | B1 | 31.50000 | 33.50 | |||
Seed weight 22-3 | D2 | 21.97000 | 23.97 | |||
Seed weight 22-4 | D2 | 22.97000 | 24.92 | |||
Seed weight 23-1 | B2 | 64.55000 | 66.55 | |||
Seed weight 23-2 | H | 52.34000 | 54.34 | |||
Seed weight 24-1 | C2 | 120.26000 | 122.26 | |||
Seed weight 24-2 | I | 26.98000 | 28.98 | |||
Seed weight 24-3 | I | 45.22000 | 47.22 | |||
Seed weight 24-4 | No Positional Data | |||||
Seed weight 25-1 | A1 | 16.16000 | 19.16 | |||
Seed weight 25-2 | B1 | 32.50000 | 46.38 | |||
Seed weight 25-3 | N | 78.51000 | 84.51 | |||
Seed weight 25-4 | O | 58.40000 | 93.37 | |||
Seed weight 25-5 | No Positional Data | |||||
Seed weight 25-6 | No Positional Data | |||||
Seed weight 25-7 | No Positional Data | |||||
Seed weight 25-8 | No Positional Data | |||||
Seed weight 27-1 | G | 52.00000 | 58.40 | |||
Seed weight 27-2 | O | 58.40000 | 60.40 | |||
Seed weight 27-3 | K | 66.43000 | 90.93 | |||
Seed weight 29-1 | B2 | 5.05000 | 7.05 | |||
Seed weight 29-2 | E | 31.27000 | 33.27 | |||
Seed weight 29-3 | D1a | 107.88000 | 109.88 | |||
Seed weight 29-4 | B2 | 5.05000 | 7.05 | |||
Seed weight 29-5 | I | 45.22000 | 47.22 | |||
Seed weight 30-1 | D1a | 107.88000 | 109.88 | |||
Seed weight 30-2 | N | 31.84000 | 33.84 | |||
Seed weight 30-3 | N | 64.45000 | 66.45 | |||
Seed weight 30-4 | A2 | 53.91000 | 55.91 | |||
Seed weight 30-5 | K | 45.20000 | 47.20 | |||
Seed weight 30-6 | J | 43.68000 | 45.68 | |||
Seed weight 30-7 | D2 | 38.34000 | 40.34 | |||
Seed weight 31-1 | C2 | 112.95000 | 114.95 | |||
Seed weight 31-2 | C2 | 106.58000 | 108.58 | |||
Seed weight 31-3 | I | 85.73000 | 87.73 | |||
Seed weight 32-1 | B1 | 64.91000 | 123.95 | |||
Seed weight 32-2 | E | 39.16000 | 45.15 | |||
Seed weight 32-3 | N | 32.84000 | 34.52 | |||
Seed weight 33-1 | C2 | 45.75000 | 61.98 | |||
Seed weight 33-2 | E | 35.79000 | 41.24 | |||
Seed weight 34-1 | A2 | 100.08000 | 159.63 | |||
Seed weight 34-2 | C2 | 113.95000 | 117.76 | |||
Seed weight 34-3 | D1b | 75.94000 | 77.34 | |||
Seed weight 34-4 | H | 81.04000 | 91.20 | |||
Seed weight 34-5 | I | 18.50000 | 46.22 | |||
Seed weight 34-6 | K | 41.00000 | 43.00 | |||
Seed weight 34-7 | L | 70.00000 | 72.00 | |||
Seed weight 34-8 | O | 54.20000 | 118.30 | |||
Seed weight 34-9 | A1 | 26.42000 | 95.95 | |||
Seed weight 34-10 | A2 | 9.14000 | 60.59 | |||
Seed weight 34-11 | D1a | 56.57000 | 69.91 | |||
Seed weight 34-12 | E | 45.40000 | 46.63 | |||
Seed weight 34-13 | A2 | 38.06000 | 145.57 | |||
Seed weight 34-14 | B1 | 100.87000 | 123.95 | |||
Seed weight 34-15 | C2 | 112.19000 | 113.38 | |||
Seed weight 34-16 | C2 | 107.58000 | 121.26 | |||
Seed weight 34-17 | D2 | 91.20000 | 93.70 | |||
Seed weight 34-18 | J | 42.00000 | 44.00 | |||
Seed weight 35-1 | A2 | 36.77000 | 100.08 | |||
Seed weight 35-2 | C2 | 113.95000 | 117.76 | |||
Seed weight 35-3 | D1b | 76.04000 | 77.34 | |||
Seed weight 35-4 | H | 67.16000 | 81.04 | |||
Seed weight 35-5 | I | 21.90000 | 46.22 | |||
Seed weight 35-6 | K | 15.59000 | 42.70 | |||
Seed weight 35-7 | L | 59.52000 | 70.36 | |||
Seed weight 35-8 | O | 113.30000 | 123.30 | |||
Seed weight 35-9 | B1 | 84.19000 | 100.87 | |||
Seed weight 35-10 | D1a | 49.84000 | 56.57 | |||
Seed weight 35-11 | M | 13.56000 | 18.58 | |||
Seed weight 36-1 | A2 | 100.08000 | 159.63 | |||
Seed weight 36-2 | C2 | 117.76000 | 126.23 | |||
Seed weight 36-3 | D1b | 76.09000 | 77.34 | |||
Seed weight 36-4 | H | 81.04000 | 89.08 | |||
Seed weight 36-5 | I | 46.22000 | 112.69 | |||
Seed weight 36-6 | K | 42.70000 | 45.59 | |||
Seed weight 36-7 | L | 70.36000 | 71.44 | |||
Seed weight 36-8 | O | 118.30000 | 127.50 | |||
Seed weight 36-9 | A1 | 26.42000 | 28.08 | |||
Seed weight 36-10 | A2 | 36.77000 | 60.59 | |||
Seed weight 36-11 | B1 | 79.19000 | 89.19 | |||
Seed weight 36-12 | E | 44.27000 | 45.40 | |||
Seed weight 36-13 | A1 | 27.78000 | 28.08 | |||
Seed weight 36-14 | B2 | 39.63000 | 72.80 | |||
Seed weight 36-15 | C1 | 73.32000 | 84.80 | |||
Seed weight 36-16 | C2 | 97.83000 | 107.58 | |||
Seed weight 36-17 | D1a | 63.62000 | 73.62 | |||
Seed weight 37-1 | No Positional Data | |||||
Seed weight 37-2 | F | 14.33000 | 17.83 | |||
Seed weight 37-3 | No Positional Data | |||||
Seed weight 37-4 | G | 62.16000 | 85.56 | |||
Seed weight 37-5 | D1a | 59.00000 | 64.70 | |||
Seed weight 37-6 | O | 58.40000 | 71.90 | |||
Seed weight 37-7 | No Positional Data | |||||
Seed weight 37-8 | A2 | 100.48000 | 119.18 | |||
Seed weight 37-9 | B1 | 11.10000 | 53.90 | |||
Seed weight 37-10 | D1b | 116.34000 | 128.04 | |||
Seed weight 37-11 | I | 60.53000 | 65.13 | |||
Seed weight 37-12 | A1 | 27.66000 | 37.86 | |||
Seed weight 38-1 | A2 | 56.13000 | 58.13 | |||
Seed weight 38-2 | C1 | 43.08000 | 45.08 | |||
Seed weight 38-3 | G | 55.81000 | 57.81 | |||
Seed weight 39-1 | No Positional Data | |||||
Seed weight 39-2 | No Positional Data | |||||
Seed weight 39-3 | No Positional Data | |||||
Seed weight 39-4 | No Positional Data | |||||
Seed weight 39-5 | No Positional Data | |||||
Seed weight 39-6 | No Positional Data | |||||
Seed weight 39-7 | No Positional Data | |||||
Seed weight 40-1 | F | 74.97000 | 76.97 | |||
Seed weight 40-2 | C2 | 106.58000 | 108.58 | |||
Seed weight 40-3 | C2 | 112.95000 | 114.95 | |||
Seed weight 40-4 | K | 55.61000 | 57.61 | |||
Seed weight 41-1 | H | 81.04000 | 89.51 | |||
Seed weight 41-2 | F | 71.41000 | 77.69 | |||
Seed weight 42-1 | D1b | 3.79000 | 9.30 | |||
Seed weight 42-2 | D2 | 34.09000 | 57.07 | |||
Seed weight 42-3 | F | 44.41000 | 62.79 | |||
Seed weight 42-4 | L | 87.41000 | 92.66 | |||
Seed weight 42-5 | M | 107.69000 | 112.08 | |||
Seed weight 43-1 | C2 | 98.07000 | 107.58 | |||
Seed weight 43-2 | D2 | 66.26000 | 79.23 | |||
Seed weight 43-3 | H | 8.48000 | 27.63 | |||
Seed weight 43-4 | L | 71.44000 | 87.41 | |||
Seed weight 44-1 | H | 52.34000 | 54.34 | |||
Seed weight 44-2 | F | 49.20000 | 82.20 | |||
Seed weight 45-1 | C2 | 39.29000 | 41.29 | |||
Seed weight 45-2 | D1a | 76.48000 | 78.48 | |||
Seed weight 45-3 | C1 | 79.62000 | 81.62 | |||
Seed weight 45-4 | M | 34.84000 | 36.84 | |||
Seed weight 45-5 | M | 70.01000 | 72.01 | |||
Seed weight 45-6 | F | 73.30000 | 107.00 | |||
Seed weight 46-1 | F | 11.37000 | 16.08 | |||
Seed weight 46-2 | No Positional Data | |||||
Seed weight 47-1 | M | 13.56000 | 18.58 | |||
Seed weight 47-2 | D2 | 24.52000 | 124.30 | |||
Seed weight 47-3 | C1 | 0.00000 | 127.76 | |||
Seed weight 49-1 | A2 | 14.99000 | 159.63 | |||
Seed weight 49-2 | B1 | 28.33000 | 32.50 | |||
Seed weight 49-3 | C1 | 131.46000 | 133.46 | |||
Seed weight 49-4 | C2 | 131.46000 | 133.46 | |||
Seed weight 49-5 | C2 | 117.76000 | 126.23 | |||
Seed weight 49-6 | C2 | 112.34000 | 112.83 | |||
Seed weight 49-7 | C2 | 99.18000 | 107.58 | |||
Seed weight 49-8 | D1b | 37.07000 | 99.18 | |||
Seed weight 49-9 | D1b | 116.34000 | 137.05 | |||
Seed weight 49-10 | D2 | 47.73000 | 113.61 | |||
Seed weight 49-11 | E | 45.09000 | 45.15 | |||
Seed weight 49-12 | F | 77.69000 | 85.33 | |||
Seed weight 49-13 | F | 75.97000 | 77.69 | |||
Seed weight 49-14 | F | 57.77000 | 75.97 | |||
Seed weight 49-15 | M | 18.58000 | 56.29 | |||
Seed weight 50-1 | D2 | 38.34000 | 40.34 | |||
Seed weight 50-2 | C1 | 94.62000 | 122.62 | |||
Seed weight 50-3 | D2 | 94.62000 | 122.62 | |||
Seed weight 50-4 | G | 27.48000 | 43.38 | |||
Seed weight 50-5 | K | 54.97000 | 71.01 | |||
Seed weight 50-6 | E | 43.29000 | 45.40 | |||
Seed weight 50-7 | F | 56.16000 | 63.68 | |||
Seed weight 50-8 | E | 43.29000 | 45.40 | |||
Seed weight 50-9 | C1 | 69.51000 | 71.51 | |||
Seed weight 50-10 | O | 38.09000 | 59.43 | |||
Seed weight 50-11 | D2 | 38.34000 | 40.34 | |||
Seed weight 50-12 | D1b | 112.62000 | 137.97 | |||
Seed weight 50-13 | I | 48.34000 | 50.34 | |||
Seed weight 50-14 | F | 27.87000 | 56.16 | |||
Seed weight 50-15 | H | 67.79000 | 81.04 | |||
Seed weight 50-16 | I | 92.51000 | 113.76 | |||
Seed weight 50-17 | A1 | 14.37000 | 19.37 | |||
Seed weight 51-1 | D1b | 19.61000 | 21.61 | |||
Seed weight 52-1 | D1a | 22.73000 | 64.59 | |||
Seed weight 52-2 | D1b | 5.01000 | 5.01 | |||
Seed weight 52-3 | D1b | 19.87000 | 21.11 | |||
Seed weight 52-4 | C2 | 113.70000 | 114.30 | |||
Seed weight 52-5 | A2 | 53.99000 | 61.99 | |||
Seed weight 52-6 | F | 108.17000 | 138.89 | |||
Seed weight 52-7 | B2 | 40.34000 | 46.86 | |||
Seed weight 52-8 | D2 | 47.38000 | 47.75 | |||
Seed weight 52-9 | I | 15.45000 | 29.81 | |||
Seed weight 53-1 | O | 51.44000 | 58.61 | |||
Seed weight 54-1 | C1 | 54.60000 | 56.60 | |||
Seed weight 54-2 | C1 | 54.60000 | 56.60 | |||
Seed weight 54-3 | C2 | 112.80000 | 114.80 |
GWAS QTL Related by Ontology | |||||||
---|---|---|---|---|---|---|---|
Pod Number | |||||||
Pod number 1 | |||||||
Pod number 2 | |||||||
Pod number 3 | |||||||
Pod number 4 | |||||||
Pod Shattering | |||||||
Pod shattering 1 | |||||||
Pod shattering 2 | |||||||
Seed Height | |||||||
Seed height 1 | |||||||
Seed Length | |||||||
Seed length 1 | |||||||
Seed Long-chain Fatty Acid | |||||||
Seed long-chain fatty acid 1 | |||||||
Seed Oil | |||||||
Seed oil 10 | |||||||
Seed oil 11 | |||||||
Seed oil 2 | |||||||
Seed oil 3 | |||||||
Seed oil 4 | |||||||
Seed oil 5 | |||||||
Seed oil 6 | |||||||
Seed oil 7 | |||||||
Seed oil 8 | |||||||
Seed oil 9 | |||||||
Seed Set | |||||||
Seed set 1 | |||||||
Seed Thickness | |||||||
Seed thickness 2 | |||||||
Seed Volume | |||||||
Seed volume 1 | |||||||
Seed Weight | |||||||
Seed weight 12 | |||||||
Seed weight 13 | |||||||
Seed weight 14 | |||||||
Seed weight 15 | |||||||
Seed weight 16 | |||||||
Seed weight 2 | |||||||
Seed weight 3 | |||||||
Seed weight 4 | |||||||
Seed weight 5 | |||||||
Seed weight 6 | |||||||
Seed weight 7 | |||||||
Seed weight 8 | |||||||
Seed weight 9 | |||||||
Seed Width | |||||||
Seed width 1 | |||||||
Seed Yield | |||||||
Seed yield 2 | |||||||
Seed yield 3 | |||||||
Seed yield 4 | |||||||
Seed yield 5 | |||||||
Seed yield 6 | |||||||
Seeds Per Plant | |||||||
Seeds per plant 2 | |||||||
Seeds per plant 4 | |||||||
Sucrose | |||||||
Sucrose 1 | |||||||
Sucrose 2 | |||||||
Total Seed Number | |||||||
Total seed number 3 |
Results of a search at SoyBase are presented in two complementary ways.
The user-submitted search term is used to find exact lexical matches to the name or description of data objects in SoyBase (QTL, genes, etc.). If an exact match is not found, and when the search term was two or more words, then a further search is done using the individual words. These text-based matches are reported in the Text column of the results table.
The goal of the ontology search is to identify data objects in SoyBase that are related to the search term but which might not have the exact search word(s) in their name or description. Data in SoyBase are tagged using a soybean-specific ontology termed a SOYnumber (SOY#). The user-submitted search term is used to search this SoyBase ontology for an exact match. If an exact match is not found, and when the search term was two or more words, the individual words are used in an additional search. Once a match is found its SOY# is used to traverse the ontology tree to identify related terms. These terms are then used to find SoyBase objects that are related to those directly identified by the search term. These ontology-based matches are reported in the Ontology column of the results table.
Occasionally unrelated SoyBase data objects will be reported in the Ontology-based results along with the correctly identified ones. This is an unavoidable consequence of the the way we have structured the underlying trait, structure and development ontologies at SoyBase. For example a search for 'protein' also returns 'oil'-related objects since both are seed components.
Data Category | Search Was Performed Against |
---|---|
Genetic Marker | Genetic Markers (SNPs, SSRs, etc.). |
Gene | Gene records (ex. Glyma.15g026400, Fad2-1). |
QTL | Bi-Parental QTL and GWAS QTL collections. |
Germplasm Collections | The Induced Mutant and Uniform Field Trial records. |
Publications | Paper records and abstracts held within the Soybase data set. |
Sitemap, News & Tutorials | SoyBase Sitemap, News archive, Upcoming meetings and Tutorials. |
As an example of how these two searching capabilities can be helpful, a search for 'oil' will return those QTL that contain the word 'oil' in their name ('Seed oil', 'Seed oil to protein ratio', etc.) in the QTL line of the Text column. The Ontology column will contain these QTL along with the related QTL 'Seed palmitate', 'Seed oleic', etc.
Note: Because of the idiosyncratic ways that authors name phenotypic and developmental traits it is always advisable to look through the Ontology-based results, even when the submitted search term seems unambiguous. This can reveal additional SoyBase objects that might have been missed using exact text matching.
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||